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Analyses and Applications of Metalloprotein Complexes

Kirberger, Michael Patrick
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Abstract

The structural characteristics associated with the binding of beneficial metals (i.e. - Mg2+, Zn2+ and Ca2+) to natural proteins has typically received more attention than competitive binding by toxic metals (e.g. – Pb2+, Hg2+, Cd2+, La3+, etc.). In this thesis, a statistical analysis of Pb2+-binding in crystallized protein structures indicates that Pb2+ does not bind preferentially with nitrogen, as generally assumed, but binds predominantly with oxygen, and to a lesser degree, sulfur. A comparison of Ca2+ and Pb2+ indicates that Pb2+ binds with a wider range of coordination numbers, with less formal change, and with less defined structure than Ca2+. The Pb2+ ion also appears to displace Ca2+ with little conformational stress in calcium binding proteins (CaBP’s). Experimental data from the binding of metals with engineered fluorescent proteins indicate that both Pb2+ and Gd3+ will occupy grafted calcium-binding sites with greater affinity than Ca2+, and strong evidence is presented to support the hypothesis that Pb2+ and Gd3+ will bind non-specifically on the protein surface. These results suggest that toxicity is associated with two binding mechanisms: displacement of the metal cofactor which disrupts protein function, and non-specific binding which maintains higher solubility of the metal.

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2008-08-04
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Keywords
metalloprotein, metal, calcium binding protein, CaBP, enhanced green fluorescent protein, EGFP, Ca2+, Pb2+, Gd3+, database, sequence analysis, prediction, binding geometry, metal toxicity.
Citation
Kirberger, Michael Patrick. "Analyses and Applications of Metalloprotein Complexes." Thesis, Georgia State University, 2008. https://doi.org//10.57709/1059235
Embargo Lift Date
2022-05-11
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