Some of the theory of nonnegative matrices is first presented. The Perron-Frobenius theorem is highlighted. Some of the important linear algebraic methods of information retrieval are surveyed. Latent Semantic Indexing (LSI), which uses the singular value de-composition is discussed. The Hyper-Text Induced Topic Search (HITS) algorithm is next considered; here the power method for finding dominant eigenvectors is employed. Through the use of a theorem by Sinkohrn and Knopp, a modified HITS method is developed. Lastly, the PageRank algorithm is discussed. Numerical examples and MATLAB programs are also provided.