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Publications from 2014

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Identifying Dynamic Protein Complexes Based on Gene Expression Profiles and PPI Networks, Min Li, Weijie Chen, Jianxin Wang, Fang-Xiang Wu, and Yi Pan

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A Novel Algorithm for Detecting Protein Complexes with the Breadth First Search, Xiwei Tang, Jianxin Wang, Min Li, Yiming He, and Yi Pan

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Distributed Power-Line Outage Detection Based on Wide Area Measurement System, Liang Zhao and Wen-Zhan Song

Publications from 2012

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Guest Editors' Introduction, Jianer Chen, Ion Măndoiu, Raj Sunderraman, Jianxin Wang, and Alexander Zelikovskiy

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Towards the Identification of Protein Complexes and Functional Modules by Integrating PPI Network and Gene Expression Data, Min Li, Xuehong Wu, Jianxin Wang, and Yi Pan

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A New Essential Protein Discovery Method Based on the Integration of Protein-protein Interaction and Gene Expression Data, Min Li, Hanhui Zhang, Jian-xin Wang, and Yi Pan

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TRIP: A method for novel transcript reconstruction from paired-end RNA-seq reads, Serghei Mangul, Adrian Caciula, Dumitru Brinza, Ion I. Măndoiu, and Alexander Zelikovskiy

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Iteration Method for Predicting Essential Proteins Based on Orthology and Protein-protein Interaction Networks, Wei Peng, Jianxin Wang, Weiping Wang, Qing Liu, Fang-Xiang Wu, and Yi Pan

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Efficient error correction for next-generation sequencing of viral amplicons, Pavel Skums, Zoya Dimitrova, David S. Campo, Gilberto Vaughan, Livia Rossi, Joseph C. Forbi, Jonny Yokosawa, Alexander Zelikovskiy, and Yury Khudyakov

Publications from 2011

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Inferring viral quasispecies spectra from 454 pyrosequencing reads, Irina Astrovskaya, Bassam Tork, Serghei Mangul, Kelly Westbrooks, Ion Măndoiu, Peter Balfe, and Alexander Zelikovskiy

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Biological Network Motif Detection and Evaluation, Wooyoung Kim, Min Li, Jianxin Wang, and Yi Pan

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Parallel Progressive Multiple Sequence Alignment on Reconfigurable Meshes, Ken Nguyen, Yi Pan, and Ge Nong

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Estimation of Alternative Splicing Isoform Frequencies from RNA-Seq Data, Marius Nicolae, Serghei Mangul, Ion I. Măndoiu, and Alexander Zelikovskiy

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A Comparison of the Functional Modules Identified from Time Course and Static PPI Network Data, Xiwei Tang, Jianxin Wang, Binbin Liu, Min Li, Gang Chen, and Yi Pan

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Integration of Breast Cancer Gene Signatures Based on Graph Centrality, Jianxin Wang, Gang Chen, Min Li, and Yi Pan

Publications from 2010

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NeuronBank: A Tool for Cataloging Neuronal Circuitry, Paul S. Katz, Robert Calin-Jageman, Akshaye Dhawan, Chad Frederick, Shuman Guo, Rasanjalee Dissanayaka, Naveen Hiremath, Wenjun Ma, Xiuyn Shen, Hsui C. Wang, Hong Yang, Sushil Prasad, Rajshekhar Sunderraman, and Ying Zhu

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Recent Advances in Clustering Methods for Protein Interaction Networks, Jianxin Wang, Min Li, Youping Deng, and Yi Pan

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Identifying Protein Complexes from Interaction Networks Based on Clique Percolation and Distance Restriction, Jianxin Wang, Binbin Liu, Min Li, and Yi Pan

Publications from 2009

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The Effect of Wavelet Families on Watermarking, Evelyn Brannock, Michael Weeks, and Robert W. Harrison

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SLC30A3 (ZnT3) Oligomerization by Dityrosine Bonds Regulates Its Subcellular Localization and Metal Transport Capacity, Gloria Salazar, Juan M. Falcon-Perez, Robert W. Harrison, and Victor Faundez

Publications from 2007

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Role of the Semi-lunar Process in Locust Jumping, David W. Cofer, James Reid, Ying Zhu, Gennady Cymbalyuk, William J. Heitler, and Donald H. Edwards

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Association Testing by Haplotype-sharing Methods Applicable to Whole-genome Analysis, Ilja M. Nolte, Andre R. de Vries, Geert T. Sijker, Ritsert C. Jansen, Dumitru Brinza, Alexander Zelikovskiy, and Gerard J. te Meerman

Publications from 2006

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ZSBT: A Novel Algorithm for Tracing DoS Attackers in MANETs, Xin Jin, Yaoxue Zhang, Yi Pan, and Yuezhi Zhou

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A Novel Approach to Phylogenetic Tree Construction using Stochastic Optimization and Clustering, Ling Qin, Yixin Chen, Yi Pan, and Ling Chen

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An Improved Ant Colony Algorithm with Diversified Solutions based on the Immune Strategy, Ling Qin, Yi Pan, Ling Chen, and Yixin Chen

Publications from 2004

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Simulated Annealing Routing and Wavelength Lower Bound Estimation on WDM Optical Multistage Networks, Ajay K. Katangur, Yi Pan, and Martin D. Fraser

Publications from 2003

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Multicasting in Multihop Optical WDM Networks with Limited Wavelength Conversion, Hong Shen, Yi Pan, John Sum, and Susumu Horiguchi